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QIAGEN Microbial Genomics Pro Suite

Focus on what really matters for your metagenomics, microbiome profiling,
pathogen typing or genome-based outbreak investigations.

All bioinformatics tools needed to power your research. Readily integrated and streamlined NGS workflows combined with state-of-the art data interpretation and visualization shift the focus from data to discovery.

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From data to discovery

Common challenges

Ever-growing sample volumes demand efficient bioinformatics. Yet a lack of well integrated analytics for microbial genomics leaves researchers and organisations with the burden of integrating and maintaining all the required bioinformatics-, statistics- and visualisation tools required to power their research.

Integrated analytics deliver research continuity. All analytics for microbial genomics and metagenomics come fully integrated into one scalable and enterprise-ready solution. Data and sample-metadata management is included.
Focus on what matters. We shift the focus from data to discovery by providing preconfigured workflows that streamline processing of raw NGS data. Researchers can focus on the interpretation of results, for example in the context of other samples or metadata.
Accurate performance. Our algorithms are designed to save time and compute resources, and to be accessible to bioinformatics experts and non-bioinformaticians alike.


Microbiome profiling

Accurately detect microbes and genes in metagenomic samples, and explores links between the taxonomic or functional composition of microbiomes and external factors like patient health or plant yield.
› Explore microbiomes

Pathogen typing and outbreak analysis

Leverage whole genome analysis for epidemiological outbreak investigation. Accurately type and characterize microbial isolates. Monitor outbreaks and track pathogen transmission back to the source using modern phylogenetic tools.
Assemble and annotate high quality reference genomes for critical type strains, and manage your database of reference genomes.

› Type pathogen isolates


Microbial genomes and microbiomes matter

Bioinformatics bridges the gap between data and discovery. Without tools for data analysis and interpretation optimized to meet the challenges
microbiologists are facing today, novel insights often remain elusive.

Which insights matter in your industry?


Powered by quality components

QIAGEN Microbial Genomics Pro Suite expands upon CLC Genomics Workbench, the industry standard platform for bioinformatics computing.

Plugins and modules add a layer of specialized tools and workflows to CLC Genomics Workbench, creating a comprehensive solution for microbial genomics and metagenomics data analysis.

There is more: Experts in the field of microbial genomics are creating plugins for QIAGEN Microbial Genomics Pro Suite to bring additional tools and services to the user community.


Start analyzing your microbial data now

We recently hosted a webinar focused on the use of QIAGEN Bioinformatics for typing, source tracking,
and other analysis tasks commonly carried out during an outbreak investigation.

Watch On-Demand Video