Latest improvements for CLC Genomics Cloud Engine


CLC Genomics Cloud Engine 1.0.15

Release date: 2017-08-25

CLC Genomics Cloud Engine 1.0.15

This update contains only changes to the software. There are no changes to the infrastructure configuration.

Bugfixes

  • Jobs will no longer fail during the final phases of performing the analysis because of AWS S3 occasionally failing to respond to requests. GCE now handles this with retries in accordance with the AWS recommended exponential backoff strategy.

Improvements

  • The new Administration Host replaces the Installation Host. The Administration Host is installed separately from the "preinstall" stack, via a separate CloudFormation script. To learn more read the "Install GCE on Amazon" section and the new "Upgrade an Existing GCE Solution" section of the Administration Manual.
  • Included with the Administration Host is a new script that will update GCE from a previous version to the newest version. To learn more read the new "Upgrade an Existing GCE Solution" section of the Administration Manual.

Frequently Asked Questions

CLC Genomics Cloud Engine Command Line Tools 1.0.15

Bugfixes

  • Job submits no longer fail because of AWS S3 occasionally failing to respond to requests. GCE CLT now handles this with retries in accordance with the AWS recommended exponential backoff strategy.

Compatibility

The CLC Genomics Cloud Engine Command Line Tools 1.0.15 is the corresponding client for the CLC Genomics Cloud Engine 1.0.15.

We recommend running the corresponding versions of service and client. However, CLC Genomics Cloud Engine Command Line Tools 1.0.15 can be  used with CLC Genomics Cloud Engine 1.0.4 and 1.0.6, and CLC Genomics Cloud Engine Command Line Tools 1.0.4 and 1.0.6 can be used with CLC Genomics Cloud Engine 1.0.15.

The CLC Genomics Cloud Engine includes the CLC Genomics Server 9.0.

Workflows to be run on the CLC Genomics Cloud Engine 1.0.15 can be designed using Workbenches compatible with CLC Genomics Server 10.0.0 and 10.0.1. These are:

  • CLC Genomics Workbench 10.0.0 and 10.0.1
  • Biomedical Genomics Workbench 4.0

Information on getting Workbench installers



CLC Genomics Cloud Engine 1.0.6

Release date: 2017-06-27

CLC Genomics Cloud Engine 1.0.6

Bug fixes

  • Fixed an issue where log URLs were not returned if a job failed early on.

CLC Genomics Cloud Engine Command Line Tools

Improvements

  • The option -profile has been added to several commands, to support the use of multiple GCE setups.
    • gce config service ... -profile <profileName>                      to associate a profile name with a particular GCE setup

    • gce config aws ... -profile <profileName>                           to configure AWS credentials for a specified GCE setup

    • gce admin autoscaling ... -profile <profileName>               to configure autoscaling for a specified GCE setup

    • gce admin executor-settings ... -profile <profileName>      to configure the Job Executor of a specified GCE setup

    • gce job ... -profile <profileName>                                       to perform job operations on a specific GCE setup


       
  • Paths to destination folders no longer need to end with a "/".
  • The IAM:GetUser AWS permission is no longer required.
  • Fetching a list of input parameters for a workflow (gce job parameters) now runs with asap as the default priority. Previously it ran with priority set to medium.

Compatibility information

The CLC Genomics Cloud Engine Command Line Tools 1.0.6 is the corresponding client for the CLC Genomics Cloud Engine 1.0.6.

We recommend running the corresponding versions of service and client. However, CLC Genomics Cloud Engine Command Line Tools 1.0.6 can be used with CLC Genomics Cloud Engine 1.0.4, and CLC Genomics Cloud Engine Command Line Tools 1.0.4 can be used with CLC Genomics Cloud Engine 1.0.6.

The CLC Genomics Cloud Engine includes the CLC Genomics Server 9.0.

Workflows to be run on the CLC Genomics Cloud Engine 1.0.6 can be designed using Workbenches compatible with CLC Genomics Server 9.0 . These are:

  • CLC Genomics Workbench 10.x
  • Biomedical Genomics Workbench 4.x
Frequently Asked Questions


CLC Genomics Cloud Engine 1.0.4

Release date: 2017-05-22

CLC Genomics Cloud Engine 1.0.4

First release
Frequently Asked Questions

Compatibility

The CLC Genomics Cloud Engine Command Line Tools 1.0.4 is the client software for the CLC Genomics Cloud Engine 1.0.4. The CLC Genomics Cloud Engine 1.0.4 includes the CLC Genomics Server 9.0. Workflows to be run on the CLC Genomics Cloud Engine 1.0.4 can be designed using Workbenches compatible with CLC Genomics Server 9.0. These are:
      • CLC Genomics Workbench 10.0.x
      • Biomedical Genomics Workbench 4.0.x

CLC Genomics Cloud Engine Command Line Tools 1.0.4

First release


© QIAGEN 2017. All rights reserved - Trademarks & Disclaimers